SPM deformation field

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Inheritance graph

Defined in file : brainvisa/toolboxes/spm/types/MRI_spm.py

Used in the following processes

CAT12 - Segment
compute brain Volume data (MNI space)
Intensity normalisation PET Pipeline (spm12)
Intensity normalisation PET Pipeline (spm8)
Optimal PET Amyloid Long (OPAL spm12)
Optimal PiB Reference Region
pet pipeline using MRI (spm12)
pet pipeline using MRI (spm8)
Preprocess for PET Pipeline using MRI (spm12)
Preprocess for PET Pipeline using MRI (spm8)
ROI based analysis PET Pipeline (spm12)
ROI based analysis PET Pipeline (spm8)
segmentation choice (spm8)
SPM12 - Normalise: Write only - generic
spm12 - Segment
spm8 - New Segment
spm8 - VBM Segmentation

Associated formats

BrainVISA volume formats
gz compressed NIFTI-1 image
MINC image
NIFTI-1 image
SPM image

Associated ontology rules

{center}/{subject}/{analysis}/{acquisition}/using_LDW_from_t1mri_to_{template}/y_<subject>_forward_deformation_field
{center}/{subject}/{analysis}/{acquisition}/using_LDW_from_t1mri_to_{template}/iy_<subject>_inverse_deformation_field
{center}/{subject}/{analysis}/{acquisition}/using_HDW_from_t1mri_to_{template}/y_<subject>_forward_deformation_field
{center}/{subject}/{analysis}/{acquisition}/using_HDW_from_t1mri_to_{template}/iy_<subject>_inverse_deformation_field

{center}/{subject}/{analysis}/{acquisition}/using_LDW_from_t1mri_to_{template}/y_<subject>_forward_deformation_field
{center}/{subject}/{analysis}/{acquisition}/using_LDW_from_t1mri_to_{template}/iy_<subject>_inverse_deformation_field
{center}/{subject}/{analysis}/{acquisition}/using_HDW_from_t1mri_to_{template}/y_<subject>_forward_deformation_field
{center}/{subject}/{analysis}/{acquisition}/using_HDW_from_t1mri_to_{template}/iy_<subject>_inverse_deformation_field

{center}/{subject}/longitudinal_preprocessings/spm12Serial/avg_{acquisition_sequence}/{analysis}/iy_<subject>_{acquisition}_to_avg_<acquisition_sequence>_inverse_deformation_field
{center}/{subject}/longitudinal_preprocessings/spm12Serial/avg_{acquisition_sequence}/{analysis}/y_<subject>_{acquisition}_to_avg_<acquisition_sequence>
{center}/{subject}/longitudinal_preprocessings/spm12Pairwise/avg_{acquisition_sequence}/{analysis}/iy_<subject>_{acquisition}_to_avg_<acquisition_sequence>_inverse_deformation_field
{center}/{subject}/longitudinal_preprocessings/spm12Pairwise/avg_{acquisition_sequence}/{analysis}/y_<subject>_{acquisition}_to_avg_<acquisition_sequence>
{center}/{subject}/spm/cat12Segment/{acquisition}/{analysis}/mri/y_<subject>
{center}/{subject}/spm/cat12Segment/{acquisition}/{analysis}/mri/iy_<subject>
{center}/{subject}/spm/spm12Segment/{acquisition}/{analysis}_LDW_from_t1mri_to_{template}/y_<subject>_forward_deformation_field
{center}/{subject}/spm/spm12Segment/{acquisition}/{analysis}_LDW_from_t1mri_to_{template}/iy_<subject>_inverse_deformation_field
{center}/{subject}/spm/spm12Segment/{acquisition}/{analysis}_HDW_from_t1mri_to_{template}/y_<subject>_forward_deformation_field
{center}/{subject}/spm/spm12Segment/{acquisition}/{analysis}_HDW_from_t1mri_to_{template}/iy_<subject>_inverse_deformation_field
{center}/{subject}/spm/spm8VBMSegmentation/{acquisition}/{analysis}_LDW_from_t1mri_to_{template}/y_<subject>_forward_deformation_field
{center}/{subject}/spm/spm8VBMSegmentation/{acquisition}/{analysis}_LDW_from_t1mri_to_{template}/iy_<subject>_inverse_deformation_field
{center}/{subject}/spm/spm8VBMSegmentation/{acquisition}/{analysis}_HDW_from_t1mri_to_{template}/y_<subject>_forward_deformation_field
{center}/{subject}/spm/spm8VBMSegmentation/{acquisition}/{analysis}_HDW_from_t1mri_to_{template}/iy_<subject>_inverse_deformation_field
{center}/{subject}/spm/spm8NewSegment/{acquisition}/{analysis}_LDW_from_t1mri_to_{template}/y_<subject>_forward_deformation_field
{center}/{subject}/spm/spm8NewSegment/{acquisition}/{analysis}_LDW_from_t1mri_to_{template}/iy_<subject>_inverse_deformation_field
{center}/{subject}/spm/spm8NewSegment/{acquisition}/{analysis}_HDW_from_t1mri_to_{template}/y_<subject>_forward_deformation_field
{center}/{subject}/spm/spm8NewSegment/{acquisition}/{analysis}_HDW_from_t1mri_to_{template}/iy_<subject>_inverse_deformation_field
{center}/{subject}/spm/spm12Shoot/{acquisition}/{analysis}_using_{template}GS/y_{prefix}<subject>_Template

Key attributes

center ,  subject ,  analysis ,  acquisition ,  template ,  direction ,  warping_method

center ,  subject ,  analysis ,  acquisition ,  template ,  direction ,  warping_method

center ,  subject ,  acquisition_sequence ,  analysis ,  acquisition ,  direction ,  processing ,  template ,  warping_method ,  prefix